Package: RVenn 1.1.0
RVenn: Set Operations for Many Sets
Set operations for many sets. The base functions for set operations in R can be used for only two sets. This package uses 'purr' to find the union, intersection and difference of three or more sets. This package also provides functions for pairwise set operations among several sets. Further, based on 'ggplot2' and 'ggforce', a Venn diagram can be drawn for two or three sets. For bigger data sets, a clustered heatmap showing presence/absence of the elements of the sets can be drawn based on the 'pheatmap' package. Finally, enrichment test can be applied to two sets whether an overlap is statistically significant or not.
Authors:
RVenn_1.1.0.tar.gz
RVenn_1.1.0.zip(r-4.5)RVenn_1.1.0.zip(r-4.4)RVenn_1.1.0.zip(r-4.3)
RVenn_1.1.0.tgz(r-4.4-any)RVenn_1.1.0.tgz(r-4.3-any)
RVenn_1.1.0.tar.gz(r-4.5-noble)RVenn_1.1.0.tar.gz(r-4.4-noble)
RVenn_1.1.0.tgz(r-4.4-emscripten)RVenn_1.1.0.tgz(r-4.3-emscripten)
RVenn.pdf |RVenn.html✨
RVenn/json (API)
| # Install 'RVenn' in R: |
| install.packages('RVenn', repos = c('https://tyakyol.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 5 years agofrom:1384115903. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 25 2024 |
| R-4.5-win | OK | Oct 25 2024 |
| R-4.5-linux | OK | Oct 25 2024 |
| R-4.4-win | OK | Oct 25 2024 |
| R-4.4-mac | OK | Oct 25 2024 |
| R-4.3-win | OK | Oct 25 2024 |
| R-4.3-mac | OK | Oct 25 2024 |
Exports:discerndiscern_pairsenrichment_testggvennoverlapoverlap_pairssetmapuniteunite_pairsVenn
Dependencies:cliclustercolorspacecpp11fansifarverggforceggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepermutepheatmappillarpkgconfigpolyclippurrrR6RColorBrewerRcppRcppEigenrlangscalessystemfontstibbletidyselecttweenrutf8vctrsveganviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Pairwise difference of many sets. | discern_pairs discern_pairs,Venn-method |
| Set difference. | discern discern,Venn-method |
| Perform an enrichment test. | enrichment_test enrichment_test,Venn-method |
| Draw the Venn diagram. | ggvenn ggvenn,Venn-method |
| Pairwise intersections of many sets. | overlap_pairs overlap_pairs,Venn-method |
| Intersection of many sets. | overlap overlap,Venn-method |
| 'RVenn': A package for set operations for many sets. | RVenn-package RVenn |
| Draw a clustered heatmap showing presence/absence of the elements. | setmap setmap,Venn-method |
| Pairwise unions of many sets. | unite_pairs unite_pairs,Venn-method |
| Union of many sets. | unite unite,Venn-method |
| An S4 class to represent multiple sets. | Venn-class |
| Build a 'Venn' object. | Venn Venn,ANY-method |
